Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm12401-201ENSMUST00000118435 228 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm8534-201ENSMUST00000118553 766 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm13222-201ENSMUST00000119638 138 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm9499-201ENSMUST00000180888 964 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm26738-201ENSMUST00000181312 601 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm2539-203ENSMUST00000181352 746 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm20926-201ENSMUST00000194457 696 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm42799-201ENSMUST00000201331 328 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm9321-201ENSMUST00000221179 778 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Mir700-201ENSMUST00000102169 79 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm11976-201ENSMUST00000119236 295 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm11848-201ENSMUST00000121207 973 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm7931-201ENSMUST00000121537 271 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm25487-201ENSMUST00000158725 125 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm9529-201ENSMUST00000177598 579 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm18183-201ENSMUST00000191024 615 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm37689-201ENSMUST00000193139 275 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm42886-201ENSMUST00000199214 466 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 AC127242.4-201ENSMUST00000221242 470 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm10145-201ENSMUST00000077776 462 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm10705-201ENSMUST00000098980 461 ntBASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Ddx55Q6ZPL9 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Mir290a-201ENSMUST00000104627 83 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm15016-201ENSMUST00000117300 720 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Gm13641-201ENSMUST00000117993 473 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx55Q6ZPL9 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms