Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm22103-201ENSMUST00000116733 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm26475-201ENSMUST00000116769 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm23620-201ENSMUST00000116812 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm25042-201ENSMUST00000116856 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm25540-201ENSMUST00000116880 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm13491-201ENSMUST00000118267 235 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm13237-201ENSMUST00000122151 635 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm23550-201ENSMUST00000179003 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm25123-201ENSMUST00000179154 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm25353-201ENSMUST00000179366 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm22992-201ENSMUST00000179496 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm25892-201ENSMUST00000179867 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm24092-201ENSMUST00000180257 121 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm3650-201ENSMUST00000180600 747 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm21392-201ENSMUST00000182950 972 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm27875-201ENSMUST00000184425 123 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm44165-201ENSMUST00000203093 1469 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 AC107453.1-201ENSMUST00000227490 3268 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.5□□□□□ -1.53
Rif1Q6PR54 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Rif1Q6PR54 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm25655-201ENSMUST00000158465 290 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm29576-201ENSMUST00000188020 678 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm28354-201ENSMUST00000190904 678 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm46364-201ENSMUST00000218548 319 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm37150-201ENSMUST00000193900 2754 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm37367-201ENSMUST00000191771 2602 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm8107-201ENSMUST00000117477 2009 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm14172-201ENSMUST00000118255 644 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm16269-201ENSMUST00000160532 409 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Mir7047-201ENSMUST00000184595 64 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm45724-201ENSMUST00000213031 420 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm28392-201ENSMUST00000077630 393 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.49□□□□□ -1.53
Rif1Q6PR54 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rif1Q6PR54 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.48□□□□□ -1.53
Rif1Q6PR54 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 129.8 ms