Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm23948-201ENSMUST00000104030 132 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm4911-201ENSMUST00000119388 945 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm13818-201ENSMUST00000119441 511 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm12808-201ENSMUST00000120597 404 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm14970-201ENSMUST00000122289 355 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm22959-201ENSMUST00000122514 303 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm26489-201ENSMUST00000157880 264 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm45596-201ENSMUST00000209279 434 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC153937.1-201ENSMUST00000218734 412 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC122858.1-201ENSMUST00000226212 433 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC122858.3-201ENSMUST00000226341 740 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm37686-201ENSMUST00000194099 2309 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm26172-201ENSMUST00000158421 134 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm9671-201ENSMUST00000171502 547 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm18343-201ENSMUST00000172802 604 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm37511-201ENSMUST00000192901 294 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm17766-201ENSMUST00000209223 442 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 AC164164.2-201ENSMUST00000221809 785 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Gm6068-201ENSMUST00000222270 387 ntBASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Shank3Q4ACU6 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Shank3Q4ACU6 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Shank3Q4ACU6 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Shank3Q4ACU6 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.77□□□□□ -1.16
Shank3Q4ACU6 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm22710-201ENSMUST00000116892 125 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm12077-201ENSMUST00000117049 364 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm23149-201ENSMUST00000158837 230 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm21399-201ENSMUST00000180210 597 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm43456-201ENSMUST00000202519 457 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.77□□□□□ -1.17
Shank3Q4ACU6 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shank3Q4ACU6 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Shank3Q4ACU6 Gm37762-201ENSMUST00000194515 3561 ntBASIC7.76□□□□□ -1.17
Shank3Q4ACU6 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shank3Q4ACU6 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shank3Q4ACU6 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.76□□□□□ -1.17
Shank3Q4ACU6 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shank3Q4ACU6 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shank3Q4ACU6 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms