Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm37511-201ENSMUST00000192901 294 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm38237-201ENSMUST00000193366 376 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm43354-201ENSMUST00000196862 346 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm44163-201ENSMUST00000205140 475 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm13626-201ENSMUST00000119435 402 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm22276-201ENSMUST00000122469 129 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm18808-201ENSMUST00000173316 462 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm7626-201ENSMUST00000195801 353 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm7557-201ENSMUST00000221935 865 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.75□□□□□ -1.33
Upf3bQ3ULL6 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm26289-201ENSMUST00000104169 131 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm25346-201ENSMUST00000104509 128 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm6977-201ENSMUST00000121568 512 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm26162-201ENSMUST00000157793 132 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Mir5107-201ENSMUST00000175586 88 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm26557-201ENSMUST00000180756 493 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm5260-201ENSMUST00000186157 949 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm8869-201ENSMUST00000195222 947 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Upf3bQ3ULL6 Gm26442-201ENSMUST00000082588 153 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms