Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Trim43aQ3TL54 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Trim43aQ3TL54 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.71□□□□□ -1.33
Trim43aQ3TL54 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.71□□□□□ -1.33
Trim43aQ3TL54 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.71□□□□□ -1.33
Trim43aQ3TL54 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm5843-201ENSMUST00000121631 476 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm24155-201ENSMUST00000175259 110 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm36965-201ENSMUST00000193797 394 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm37477-201ENSMUST00000195215 884 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim43aQ3TL54 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm16073-201ENSMUST00000116032 517 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm14382-201ENSMUST00000117374 437 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm12653-201ENSMUST00000117778 561 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm15216-201ENSMUST00000118058 277 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm14614-201ENSMUST00000119873 384 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm4992-201ENSMUST00000120256 768 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm14612-201ENSMUST00000121522 881 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm12175-201ENSMUST00000122081 345 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm25556-201ENSMUST00000158077 144 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm37439-201ENSMUST00000193150 856 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm5050-201ENSMUST00000197164 775 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 AC129597.1-201ENSMUST00000223046 1234 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Mir7b-201ENSMUST00000083557 111 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.7□□□□□ -1.34
Trim43aQ3TL54 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Trim43aQ3TL54 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms