Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21489-201ENSMUST00000189668 818 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm29573-201ENSMUST00000190291 919 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm29503-201ENSMUST00000191044 930 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm37771-201ENSMUST00000193121 265 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm42983-201ENSMUST00000199879 815 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm5317-201ENSMUST00000204445 847 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm44118-201ENSMUST00000204665 229 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm18537-201ENSMUST00000205709 989 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm18585-201ENSMUST00000215197 556 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 AC153957.1-201ENSMUST00000215235 229 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm19340-201ENSMUST00000221995 345 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Col8a1Q00780 AC156790.3-201ENSMUST00000226200 254 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm43537-201ENSMUST00000199064 3110 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Gm37520-201ENSMUST00000194883 2672 ntBASIC6.1□□□□□ -1.43
Col8a1Q00780 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Col8a1Q00780 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col8a1Q00780 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 AC165260.6-202ENSMUST00000224959 1958 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm17841-201ENSMUST00000210711 2425 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm22774-201ENSMUST00000102084 109 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms