Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Tpm1P58771 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Tpm1P58771 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Tpm1P58771 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Tpm1P58771 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.93□□□□□ -1.3
Tpm1P58771 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.93□□□□□ -1.3
Tpm1P58771 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.93□□□□□ -1.3
Tpm1P58771 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Tpm1P58771 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Tpm1P58771 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Tpm1P58771 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Mir674-201ENSMUST00000102421 100 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm8624-201ENSMUST00000118083 432 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm14515-201ENSMUST00000121327 216 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm25487-201ENSMUST00000158725 125 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Tpm1P58771 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Tpm1P58771 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Tpm1P58771 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm4785-201ENSMUST00000191025 751 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm17895-201ENSMUST00000194028 874 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.92□□□□□ -1.3
Tpm1P58771 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm45628-201ENSMUST00000210849 274 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Tpm1P58771 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Tpm1P58771 Mir106b-201ENSMUST00000083580 82 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Gm5446-201ENSMUST00000091762 784 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.92□□□□□ -1.3
Tpm1P58771 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Tpm1P58771 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Tpm1P58771 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Tpm1P58771 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Tpm1P58771 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Tpm1P58771 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm25083-201ENSMUST00000102319 92 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm12306-201ENSMUST00000117256 171 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm14382-201ENSMUST00000117374 437 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm11726-201ENSMUST00000121028 424 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm14728-201ENSMUST00000122196 492 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm23259-201ENSMUST00000158318 303 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm4308-201ENSMUST00000179735 914 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm27299-201ENSMUST00000184593 103 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm28195-201ENSMUST00000186992 372 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Tpm1P58771 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm8009-201ENSMUST00000191672 436 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm5853-201ENSMUST00000197183 632 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm32158-201ENSMUST00000200135 404 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm29759-201ENSMUST00000205860 327 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Gm32983-201ENSMUST00000208500 505 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.91□□□□□ -1.3
Tpm1P58771 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Tpm1P58771 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms