Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HttP42859 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Gm15877-201ENSMUST00000121897 964 ntBASIC6.45□□□□□ -1.38
HttP42859 Gm15335-201ENSMUST00000122442 411 ntBASIC6.45□□□□□ -1.38
HttP42859 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Gm8524-201ENSMUST00000186232 379 ntBASIC6.45□□□□□ -1.38
HttP42859 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.45□□□□□ -1.38
HttP42859 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.45□□□□□ -1.38
HttP42859 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.45□□□□□ -1.38
HttP42859 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HttP42859 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HttP42859 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Gm16082-201ENSMUST00000115992 377 ntBASIC6.45□□□□□ -1.38
HttP42859 Gm11507-201ENSMUST00000156462 412 ntBASIC6.45□□□□□ -1.38
HttP42859 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.45□□□□□ -1.38
HttP42859 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.45□□□□□ -1.38
HttP42859 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
HttP42859 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.45□□□□□ -1.38
HttP42859 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.45□□□□□ -1.38
HttP42859 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Gm38042-201ENSMUST00000191614 5208 ntBASIC6.45□□□□□ -1.38
HttP42859 Gm6134-201ENSMUST00000117265 171 ntBASIC6.45□□□□□ -1.38
HttP42859 Gm26310-201ENSMUST00000157766 117 ntBASIC6.45□□□□□ -1.38
HttP42859 Gm25224-201ENSMUST00000158195 68 ntBASIC6.45□□□□□ -1.38
HttP42859 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.45□□□□□ -1.38
HttP42859 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.45□□□□□ -1.38
HttP42859 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.45□□□□□ -1.38
HttP42859 Gm18791-201ENSMUST00000204611 726 ntBASIC6.45□□□□□ -1.38
HttP42859 Gm19174-201ENSMUST00000216944 956 ntBASIC6.45□□□□□ -1.38
HttP42859 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.45□□□□□ -1.38
HttP42859 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.45□□□□□ -1.38
HttP42859 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HttP42859 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HttP42859 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 AC154461.6-201ENSMUST00000224815 2630 ntBASIC6.44□□□□□ -1.38
HttP42859 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Gm43561-201ENSMUST00000199866 448 ntBASIC6.44□□□□□ -1.38
HttP42859 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.44□□□□□ -1.38
HttP42859 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.44□□□□□ -1.38
HttP42859 Gm8412-201ENSMUST00000077493 440 ntBASIC6.44□□□□□ -1.38
HttP42859 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
HttP42859 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HttP42859 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Gm16276-201ENSMUST00000131218 262 ntBASIC6.44□□□□□ -1.38
HttP42859 Gm8185-201ENSMUST00000160999 669 ntBASIC6.44□□□□□ -1.38
HttP42859 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HttP42859 Mir6899-201ENSMUST00000184798 64 ntBASIC6.44□□□□□ -1.38
HttP42859 Gm45228-201ENSMUST00000206585 352 ntBASIC6.44□□□□□ -1.38
HttP42859 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.44□□□□□ -1.38
HttP42859 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HttP42859 Mir449a-201ENSMUST00000083641 91 ntBASIC6.44□□□□□ -1.38
HttP42859 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HttP42859 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
HttP42859 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.43□□□□□ -1.38
HttP42859 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.43□□□□□ -1.38
HttP42859 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HttP42859 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.43□□□□□ -1.38
HttP42859 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.43□□□□□ -1.38
HttP42859 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HttP42859 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms