Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm44045-201ENSMUST00000204906 2520 ntBASIC8.46□□□□□ -1.05
Col18a1P39061 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Mir92b-201ENSMUST00000102300 83 ntBASIC8.46□□□□□ -1.05
Col18a1P39061 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC8.46□□□□□ -1.05
Col18a1P39061 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm29160-201ENSMUST00000190094 699 ntBASIC8.46□□□□□ -1.05
Col18a1P39061 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC8.46□□□□□ -1.05
Col18a1P39061 AC164567.4-201ENSMUST00000219708 483 ntBASIC8.46□□□□□ -1.05
Col18a1P39061 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC8.46□□□□□ -1.05
Col18a1P39061 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC8.46□□□□□ -1.05
Col18a1P39061 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Col18a1P39061 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col18a1P39061 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Col18a1P39061 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Col18a1P39061 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Col18a1P39061 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
Col18a1P39061 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col18a1P39061 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Col18a1P39061 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Col18a1P39061 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC8.46□□□□□ -1.06
Col18a1P39061 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Col18a1P39061 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC8.46□□□□□ -1.06
Col18a1P39061 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col18a1P39061 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col18a1P39061 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col18a1P39061 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Col18a1P39061 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Col18a1P39061 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC8.45□□□□□ -1.06
Col18a1P39061 Gm14550-201ENSMUST00000117918 407 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC8.45□□□□□ -1.06
Col18a1P39061 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Col18a1P39061 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC8.45□□□□□ -1.06
Col18a1P39061 Gm8641-201ENSMUST00000186995 826 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Gm18444-201ENSMUST00000191239 629 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC8.45□□□□□ -1.06
Col18a1P39061 Gm44604-201ENSMUST00000205475 496 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.45□□□□□ -1.06
Col18a1P39061 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Col18a1P39061 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Col18a1P39061 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Col18a1P39061 AC174459.1-201ENSMUST00000224476 1943 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC8.45□□□□□ -1.06
Col18a1P39061 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.45□□□□□ -1.06
Col18a1P39061 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Col18a1P39061 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 AC141476.1-201ENSMUST00000224988 3387 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Col18a1P39061 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Gm24886-201ENSMUST00000104384 123 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC8.45□□□□□ -1.06
Col18a1P39061 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Gm14871-201ENSMUST00000119056 194 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Gm13531-201ENSMUST00000121893 543 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Gm16060-201ENSMUST00000153140 478 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Mir1963-201ENSMUST00000158594 59 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Col18a1P39061 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 AC159886.1-201ENSMUST00000217099 1091 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 AC153544.1-201ENSMUST00000217988 400 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 AC154657.1-201ENSMUST00000226394 775 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC8.45□□□□□ -1.06
Col18a1P39061 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
Col18a1P39061 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Col18a1P39061 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 AC098728.1-202ENSMUST00000226656 2198 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col18a1P39061 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC8.45□□□□□ -1.06
Col18a1P39061 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms