Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm22642-201ENSMUST00000175352 252 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upk2P38575 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Upk2P38575 Gm29072-201ENSMUST00000191149 678 ntBASIC5.47□□□□□ -1.53
Upk2P38575 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm17934-201ENSMUST00000192818 422 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm37758-201ENSMUST00000194275 629 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm37871-201ENSMUST00000194973 688 ntBASIC5.47□□□□□ -1.53
Upk2P38575 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm43850-201ENSMUST00000202021 578 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Upk2P38575 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm3785-201ENSMUST00000221000 202 ntBASIC5.47□□□□□ -1.53
Upk2P38575 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.47□□□□□ -1.53
Upk2P38575 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.47□□□□□ -1.53
Upk2P38575 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm22300-201ENSMUST00000082661 126 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Upk2P38575 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Upk2P38575 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upk2P38575 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upk2P38575 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Upk2P38575 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.47□□□□□ -1.53
Upk2P38575 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.47□□□□□ -1.53
Upk2P38575 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Upk2P38575 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Upk2P38575 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Upk2P38575 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Upk2P38575 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Upk2P38575 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.53
Upk2P38575 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Upk2P38575 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Upk2P38575 Gm14098-201ENSMUST00000119295 623 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Gm15181-201ENSMUST00000120142 177 ntBASIC5.46□□□□□ -1.54
Upk2P38575 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Gm5283-201ENSMUST00000177874 334 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Mir7058-201ENSMUST00000184637 75 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Gm18700-201ENSMUST00000185791 553 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Upk2P38575 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.46□□□□□ -1.54
Upk2P38575 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Gm22711-202ENSMUST00000197029 135 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Gm30708-201ENSMUST00000202183 312 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.46□□□□□ -1.54
Upk2P38575 Gm7368-201ENSMUST00000213307 367 ntBASIC5.46□□□□□ -1.54
Upk2P38575 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.46□□□□□ -1.54
Upk2P38575 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.46□□□□□ -1.54
Upk2P38575 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Mir7b-201ENSMUST00000083557 111 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Upk2P38575 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Upk2P38575 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk2P38575 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Upk2P38575 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.46□□□□□ -1.54
Upk2P38575 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.45□□□□□ -1.54
Upk2P38575 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Upk2P38575 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.45□□□□□ -1.54
Upk2P38575 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk2P38575 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms