Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm9604-201ENSMUST00000211175 433 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm45514-201ENSMUST00000211531 689 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp4P35123 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp4P35123 CT030194.2-201ENSMUST00000225752 379 ntBASIC7.07□□□□□ -1.28
Usp4P35123 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.07□□□□□ -1.28
Usp4P35123 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp4P35123 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp4P35123 Gm23054-201ENSMUST00000082804 162 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.07□□□□□ -1.28
Usp4P35123 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Usp4P35123 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp4P35123 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Usp4P35123 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.06□□□□□ -1.28
Usp4P35123 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Usp4P35123 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm15484-201ENSMUST00000118871 828 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Usp4P35123 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.06□□□□□ -1.28
Usp4P35123 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp4P35123 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.06□□□□□ -1.28
Usp4P35123 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Gm16563-201ENSMUST00000162673 423 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm17786-201ENSMUST00000182000 427 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm18501-201ENSMUST00000185363 664 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm28070-201ENSMUST00000191502 445 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm38030-201ENSMUST00000192376 475 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Gm8869-201ENSMUST00000195222 947 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm4585-201ENSMUST00000207218 452 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp4P35123 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Gm8275-201ENSMUST00000219732 424 ntBASIC7.06□□□□□ -1.28
Usp4P35123 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp4P35123 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp4P35123 Thap6-201ENSMUST00000191860 3151 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Usp4P35123 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp4P35123 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Usp4P35123 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Usp4P35123 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.06□□□□□ -1.28
Usp4P35123 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.06□□□□□ -1.28
Usp4P35123 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp4P35123 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp4P35123 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp4P35123 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Gm3563-201ENSMUST00000172963 1628 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.05□□□□□ -1.28
Usp4P35123 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Mir708-201ENSMUST00000102189 109 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
Usp4P35123 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms