Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm12193-201ENSMUST00000117250 379 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Col2a1P28481 Gm7152-201ENSMUST00000163570 605 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Mir6992-201ENSMUST00000183342 109 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Gm5990-201ENSMUST00000203126 746 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Gm9293-201ENSMUST00000223096 306 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col2a1P28481 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC7.14□□□□□ -1.27
Col2a1P28481 Gm24041-201ENSMUST00000083115 156 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col2a1P28481 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Gm43900-201ENSMUST00000204868 2669 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Col2a1P28481 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Col2a1P28481 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC7.13□□□□□ -1.27
Col2a1P28481 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Gm11105-201ENSMUST00000112781 478 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm13013-201ENSMUST00000119087 523 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm25459-201ENSMUST00000157953 114 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm22724-201ENSMUST00000158091 127 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm23050-201ENSMUST00000158775 165 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Gm21772-201ENSMUST00000169213 478 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm17126-201ENSMUST00000172276 523 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm20401-201ENSMUST00000173717 212 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm26057-201ENSMUST00000178099 165 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Gm43744-201ENSMUST00000196387 688 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Col2a1P28481 AC113198.1-201ENSMUST00000226353 832 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Col2a1P28481 Gm24200-201ENSMUST00000082955 157 ntBASIC7.13□□□□□ -1.27
Col2a1P28481 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col2a1P28481 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Col2a1P28481 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
Col2a1P28481 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col2a1P28481 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
Col2a1P28481 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col2a1P28481 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Col2a1P28481 Gm11885-201ENSMUST00000118473 1428 ntBASIC7.12□□□□□ -1.27
Col2a1P28481 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col2a1P28481 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.12□□□□□ -1.27
Col2a1P28481 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col2a1P28481 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col2a1P28481 Gm15237-201ENSMUST00000122104 469 ntBASIC7.12□□□□□ -1.27
Col2a1P28481 Gm5401-201ENSMUST00000122444 365 ntBASIC7.12□□□□□ -1.27
Col2a1P28481 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col2a1P28481 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC7.12□□□□□ -1.27
Col2a1P28481 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms