Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm24236-201ENSMUST00000157794 134 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm24682-201ENSMUST00000158764 137 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm24157-201ENSMUST00000175265 111 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm23139-201ENSMUST00000179454 132 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm38177-201ENSMUST00000192213 1040 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm37375-201ENSMUST00000193859 387 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm37385-201ENSMUST00000195223 387 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm43798-201ENSMUST00000202056 394 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm44971-201ENSMUST00000206192 337 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm45628-201ENSMUST00000210849 274 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm4247-201ENSMUST00000211441 1042 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Cdx1P18111 AC151971.2-201ENSMUST00000217540 909 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 CT030182.4-201ENSMUST00000223647 645 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 AC161275.1-201ENSMUST00000224668 208 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 AC122459.3-201ENSMUST00000228508 1042 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm10145-201ENSMUST00000077776 462 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm26442-201ENSMUST00000082588 153 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cdx1P18111 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Cdx1P18111 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm6987-201ENSMUST00000119319 428 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm11320-201ENSMUST00000119434 463 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm11338-201ENSMUST00000120086 1160 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm11498-201ENSMUST00000120660 949 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cdx1P18111 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm25048-201ENSMUST00000158598 91 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm4202-201ENSMUST00000169025 733 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm3242-201ENSMUST00000171273 485 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Mir6241-201ENSMUST00000184225 103 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Mir378d-201ENSMUST00000184232 110 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Mir6357-201ENSMUST00000184246 104 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm19480-201ENSMUST00000185547 667 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm28952-201ENSMUST00000189285 681 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm37260-201ENSMUST00000193748 1251 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm45156-201ENSMUST00000207255 439 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm18562-201ENSMUST00000209949 915 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm8288-201ENSMUST00000223406 593 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cdx1P18111 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cdx1P18111 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms