Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
P06344 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
P06344 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
P06344 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
P06344 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.69□□□□□ -1.5
P06344 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.69□□□□□ -1.5
P06344 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.69□□□□□ -1.5
P06344 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
P06344 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
P06344 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.69□□□□□ -1.5
P06344 Gm44417-201ENSMUST00000203298 3359 ntBASIC5.69□□□□□ -1.5
P06344 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
P06344 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
P06344 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.69□□□□□ -1.5
P06344 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.69□□□□□ -1.5
P06344 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.69□□□□□ -1.5
P06344 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
P06344 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.69□□□□□ -1.5
P06344 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
P06344 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
P06344 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
P06344 Gm11976-201ENSMUST00000119236 295 ntBASIC5.69□□□□□ -1.5
P06344 Gm14375-201ENSMUST00000119490 855 ntBASIC5.69□□□□□ -1.5
P06344 Gm5387-201ENSMUST00000119776 857 ntBASIC5.69□□□□□ -1.5
P06344 Gm13207-201ENSMUST00000119862 773 ntBASIC5.69□□□□□ -1.5
P06344 Gm13642-201ENSMUST00000121697 381 ntBASIC5.69□□□□□ -1.5
P06344 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.69□□□□□ -1.5
P06344 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Gm25374-201ENSMUST00000158158 101 ntBASIC5.69□□□□□ -1.5
P06344 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.69□□□□□ -1.5
P06344 Mir6367-201ENSMUST00000183385 102 ntBASIC5.69□□□□□ -1.5
P06344 Gm27348-201ENSMUST00000184511 170 ntBASIC5.69□□□□□ -1.5
P06344 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.69□□□□□ -1.5
P06344 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.69□□□□□ -1.5
P06344 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.69□□□□□ -1.5
P06344 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.69□□□□□ -1.5
P06344 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.69□□□□□ -1.5
P06344 Gm18103-201ENSMUST00000216621 779 ntBASIC5.69□□□□□ -1.5
P06344 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.69□□□□□ -1.5
P06344 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.69□□□□□ -1.5
P06344 AV026068-218ENSMUST00000223980 575 ntBASIC5.69□□□□□ -1.5
P06344 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.69□□□□□ -1.5
P06344 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Gm5321-201ENSMUST00000072050 447 ntBASIC5.69□□□□□ -1.5
P06344 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
P06344 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
P06344 Gm22581-201ENSMUST00000083735 136 ntBASIC5.69□□□□□ -1.5
P06344 Gm22351-201ENSMUST00000083925 107 ntBASIC5.69□□□□□ -1.5
P06344 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.69□□□□□ -1.5
P06344 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
P06344 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P06344 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
P06344 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.69□□□□□ -1.5
P06344 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
P06344 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P06344 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.68□□□□□ -1.5
P06344 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.68□□□□□ -1.5
P06344 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.68□□□□□ -1.5
P06344 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P06344 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.68□□□□□ -1.5
P06344 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.68□□□□□ -1.5
P06344 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P06344 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
P06344 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P06344 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.68□□□□□ -1.5
P06344 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P06344 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.68□□□□□ -1.5
P06344 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
P06344 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
P06344 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
P06344 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
P06344 Gm12565-201ENSMUST00000119004 649 ntBASIC5.68□□□□□ -1.5
P06344 Gm16511-201ENSMUST00000120019 564 ntBASIC5.68□□□□□ -1.5
P06344 Gm14900-201ENSMUST00000120304 733 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms