Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm25437-201ENSMUST00000158282 132 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm23046-201ENSMUST00000158369 284 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm6061-201ENSMUST00000175860 492 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm21430-201ENSMUST00000182998 998 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm3841-201ENSMUST00000191399 451 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm5995-201ENSMUST00000204107 1273 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm18645-201ENSMUST00000209593 651 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm34424-201ENSMUST00000213400 782 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm9289-201ENSMUST00000221269 606 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC162183.1-201ENSMUST00000224843 472 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC113031.2-201ENSMUST00000226132 579 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 AC122357.2-201ENSMUST00000220732 1525 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm6913-201ENSMUST00000100019 348 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm11972-201ENSMUST00000118514 389 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm13930-201ENSMUST00000118569 368 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm13940-201ENSMUST00000121023 301 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm12642-201ENSMUST00000121098 876 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm14413-201ENSMUST00000122158 408 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm24738-201ENSMUST00000158856 123 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm6650-201ENSMUST00000166710 614 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm18397-201ENSMUST00000176704 587 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm26933-201ENSMUST00000182320 827 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Mir6940-201ENSMUST00000183447 70 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms