Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm7058-201ENSMUST00000119209 902 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm11472-201ENSMUST00000121305 556 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm2986-201ENSMUST00000121603 382 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm25904-201ENSMUST00000158491 143 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm24682-201ENSMUST00000158764 137 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm42708-201ENSMUST00000196332 905 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Pramel-201ENSMUST00000118979 1383 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm22284-201ENSMUST00000104132 132 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm8250-201ENSMUST00000117398 774 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm7212-201ENSMUST00000120817 348 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm22548-201ENSMUST00000174899 78 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm43849-201ENSMUST00000201086 215 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Gm43850-201ENSMUST00000202021 578 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cldn3Q9Z0G9 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms