Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm14755-201ENSMUST00000118037 384 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm25342-201ENSMUST00000157459 122 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm23386-201ENSMUST00000158585 144 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29385-201ENSMUST00000186831 363 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm18799-201ENSMUST00000189104 913 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm35323-201ENSMUST00000191836 499 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm2229-201ENSMUST00000193328 710 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm38237-201ENSMUST00000193366 376 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm18781-201ENSMUST00000211252 924 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm18586-201ENSMUST00000217265 518 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm10540-201ENSMUST00000097581 276 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm38105-201ENSMUST00000192112 2621 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Smc1aQ9CU62 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.2□□□□□ -1.26
Smc1aQ9CU62 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm24272-201ENSMUST00000102329 98 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm11271-201ENSMUST00000116054 440 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm12135-201ENSMUST00000119170 466 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm12654-201ENSMUST00000120387 587 ntBASIC7.19□□□□□ -1.26
Smc1aQ9CU62 Gm2986-201ENSMUST00000121603 382 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms