Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Gm26442-201ENSMUST00000082588 153 ntBASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Gm24695-201ENSMUST00000083877 83 ntBASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Phxr4-202ENSMUST00000216590 1391 ntBASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rab11fip3Q8CHD8 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 AC158982.1-205ENSMUST00000227339 1876 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm24069-201ENSMUST00000104512 127 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm14018-201ENSMUST00000119042 455 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm6977-201ENSMUST00000121568 512 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm12152-201ENSMUST00000122465 684 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm37135-201ENSMUST00000192652 534 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm5853-201ENSMUST00000197183 632 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm7492-201ENSMUST00000201745 725 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm44538-201ENSMUST00000205615 348 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm7780-201ENSMUST00000214787 406 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gm19340-201ENSMUST00000221995 345 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 AC105950.1-201ENSMUST00000222637 408 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.56□□□□□ -1.04
Rab11fip3Q8CHD8 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm7350-201ENSMUST00000120964 636 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm10177-201ENSMUST00000160052 444 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Mir6921-201ENSMUST00000183719 80 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm28665-201ENSMUST00000189269 670 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 AC139568.1-201ENSMUST00000222878 486 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 AC165106.1-201ENSMUST00000227580 408 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rab11fip3Q8CHD8 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms