Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Vps53Q8CCB4 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Vps53Q8CCB4 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Vps53Q8CCB4 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm24272-201ENSMUST00000102329 98 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm26079-201ENSMUST00000104066 133 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm24790-201ENSMUST00000104285 132 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Mir7072-201ENSMUST00000184542 60 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm18849-201ENSMUST00000189861 560 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm46203-201ENSMUST00000218130 478 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm6575-201ENSMUST00000222946 697 ntBASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Vps53Q8CCB4 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm28320-201ENSMUST00000187777 2273 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm24069-201ENSMUST00000104512 127 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm5793-201ENSMUST00000119393 630 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm15061-201ENSMUST00000121076 1046 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm18006-201ENSMUST00000177411 662 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Mir6337-201ENSMUST00000184194 105 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm2229-201ENSMUST00000193328 710 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm4556-201ENSMUST00000217808 355 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm17917-201ENSMUST00000218561 953 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 AC165260.4-201ENSMUST00000225924 724 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Vps53Q8CCB4 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms