Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm43567-201ENSMUST00000197581 1978 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Immt-201ENSMUST00000064062 2728 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm9266-201ENSMUST00000117401 484 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm14013-201ENSMUST00000119006 270 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm14655-201ENSMUST00000120124 578 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm12019-201ENSMUST00000121258 532 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm26037-201ENSMUST00000158150 311 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm6467-201ENSMUST00000171547 609 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm3654-201ENSMUST00000173038 909 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm7693-201ENSMUST00000183257 988 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC9.25□□□□□ -0.93
Trim35Q8C006 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm9057-201ENSMUST00000198791 296 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm38430-201ENSMUST00000209888 1240 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm18854-201ENSMUST00000211196 329 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 AC154558.1-201ENSMUST00000222278 415 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 AC124433.2-201ENSMUST00000223867 291 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 AC154270.1-201ENSMUST00000227226 426 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Olfr656-201ENSMUST00000098172 991 ntAPPRIS P2 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Zfp873-204ENSMUST00000210325 2360 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Muc20-202ENSMUST00000115116 3673 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm43161-201ENSMUST00000197020 1688 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 AC126804.1-201ENSMUST00000216609 2079 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Hdlbp-201ENSMUST00000042498 4427 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Adcy4-202ENSMUST00000170223 3501 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gapdhs-201ENSMUST00000074758 1368 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm31135-201ENSMUST00000208460 1782 ntTSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Rtl4-202ENSMUST00000112843 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Ppil4-201ENSMUST00000015901 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm43627-201ENSMUST00000197119 2299 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Prickle2-202ENSMUST00000113445 3708 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm19144-201ENSMUST00000221921 1859 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Ptprr-207ENSMUST00000155606 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Sez6l-203ENSMUST00000197425 3199 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Mir681-201ENSMUST00000102111 110 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm13726-201ENSMUST00000121278 794 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm12297-201ENSMUST00000121380 979 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm23563-201ENSMUST00000174900 251 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm27034-201ENSMUST00000182552 940 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm27210-201ENSMUST00000184263 402 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm29192-201ENSMUST00000190942 377 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Trav4-1-201ENSMUST00000199078 330 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm44419-201ENSMUST00000203338 229 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm44765-201ENSMUST00000206927 601 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 AC142273.1-201ENSMUST00000213723 673 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 AC159244.2-201ENSMUST00000222051 220 ntTSL 3 BASIC9.24□□□□□ -0.93
Trim35Q8C006 AC159106.2-201ENSMUST00000223732 486 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 AC154548.2-201ENSMUST00000224621 469 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 AC163351.1-201ENSMUST00000225539 737 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms