Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm37772-201ENSMUST00000191635 1394 ntBASIC9.48□□□□□ -0.89
Clcn1Q64347 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.48□□□□□ -0.89
Clcn1Q64347 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC9.48□□□□□ -0.89
Clcn1Q64347 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Clcn1Q64347 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm36927-201ENSMUST00000192504 1841 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm13771-201ENSMUST00000117988 238 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm11859-201ENSMUST00000118099 455 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm11876-201ENSMUST00000120002 269 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm11338-201ENSMUST00000120086 1160 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm12313-201ENSMUST00000121347 421 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Mup-ps4-201ENSMUST00000151005 539 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm23034-201ENSMUST00000158001 147 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm15508-201ENSMUST00000160330 325 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm20612-201ENSMUST00000176318 236 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm28779-201ENSMUST00000189678 323 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm8896-201ENSMUST00000197434 1106 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm1969-201ENSMUST00000198125 1220 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm42594-201ENSMUST00000199511 246 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC9.47□□□□□ -0.89
Clcn1Q64347 AC151901.1-201ENSMUST00000218274 180 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm22504-201ENSMUST00000082963 139 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Mir7b-201ENSMUST00000083557 111 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm24765-201ENSMUST00000083691 103 ntBASIC9.47□□□□□ -0.89
Clcn1Q64347 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Clcn1Q64347 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clcn1Q64347 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clcn1Q64347 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clcn1Q64347 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Clcn1Q64347 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Clcn1Q64347 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Clcn1Q64347 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Clcn1Q64347 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Clcn1Q64347 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Clcn1Q64347 Gm13928-201ENSMUST00000120326 1732 ntBASIC9.46□□□□□ -0.89
Clcn1Q64347 Grik1-210ENSMUST00000228034 2708 ntBASIC9.46□□□□□ -0.89
Clcn1Q64347 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Clcn1Q64347 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm23942-201ENSMUST00000101956 107 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm17170-201ENSMUST00000112785 316 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm7821-201ENSMUST00000117111 788 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm7834-201ENSMUST00000117560 437 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm13711-201ENSMUST00000119708 453 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC9.46□□□□□ -0.9
Clcn1Q64347 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Mir1983-201ENSMUST00000157523 132 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm22847-201ENSMUST00000157707 105 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Mir8120-201ENSMUST00000185035 139 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm38226-201ENSMUST00000192207 521 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Clcn1Q64347 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm9267-201ENSMUST00000222831 404 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Clcn1Q64347 CT025602.1-201ENSMUST00000227281 382 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm10221-201ENSMUST00000088299 309 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Clcn1Q64347 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm43750-201ENSMUST00000199027 2493 ntBASIC9.46□□□□□ -0.9
Clcn1Q64347 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Clcn1Q64347 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clcn1Q64347 Gm37289-201ENSMUST00000195409 1402 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms