Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm3544-201ENSMUST00000196129 305 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm5306-201ENSMUST00000203325 757 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm4083-201ENSMUST00000207158 451 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm2996-201ENSMUST00000211398 537 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Mir3068-201ENSMUST00000083004 136 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps54Q5SPW0 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm15186-201ENSMUST00000119345 563 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm16269-201ENSMUST00000160532 409 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm27512-201ENSMUST00000175328 126 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Mir7082-201ENSMUST00000183526 92 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 AC159246.1-201ENSMUST00000214478 249 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm9293-201ENSMUST00000223096 306 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm6990-201ENSMUST00000086830 348 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.54□□□□□ -1.2
Vps54Q5SPW0 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps54Q5SPW0 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm13835-201ENSMUST00000118459 685 ntBASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm11902-201ENSMUST00000118849 270 ntBASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm13818-201ENSMUST00000119441 511 ntBASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm13899-201ENSMUST00000121519 1255 ntBASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm27005-201ENSMUST00000182783 921 ntBASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm28443-201ENSMUST00000189081 698 ntBASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm37477-201ENSMUST00000195215 884 ntBASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps54Q5SPW0 Gm29778-201ENSMUST00000201667 466 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms