Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.84□□□□□ -1.47
Scn1bP97952 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1bP97952 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Scn1bP97952 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1bP97952 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.84□□□□□ -1.47
Scn1bP97952 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Scn1bP97952 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1bP97952 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Scn1bP97952 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.84□□□□□ -1.48
Scn1bP97952 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.84□□□□□ -1.48
Scn1bP97952 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Scn1bP97952 AC187103.1-201ENSMUST00000224641 1475 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm45360-201ENSMUST00000210698 1405 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm23437-201ENSMUST00000104036 127 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm23834-201ENSMUST00000104436 129 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm11926-201ENSMUST00000118520 430 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm12447-201ENSMUST00000119110 470 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm13207-201ENSMUST00000119862 773 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm14613-201ENSMUST00000122239 752 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm24781-201ENSMUST00000157636 117 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm23897-201ENSMUST00000158110 158 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm7420-201ENSMUST00000162836 842 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm8245-201ENSMUST00000182434 987 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm28894-201ENSMUST00000185214 615 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm37369-201ENSMUST00000194179 615 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm45157-201ENSMUST00000208729 401 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Scn1bP97952 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm19011-201ENSMUST00000221777 808 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm18940-201ENSMUST00000222518 871 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Scn1bP97952 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm9788-201ENSMUST00000057038 906 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Scn1bP97952 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.83□□□□□ -1.48
Scn1bP97952 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn1bP97952 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Scn1bP97952 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Scn1bP97952 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.82□□□□□ -1.48
Scn1bP97952 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.82□□□□□ -1.48
Scn1bP97952 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Scn1bP97952 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Scn1bP97952 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Scn1bP97952 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Scn1bP97952 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Gm12879-201ENSMUST00000120003 1182 ntBASIC5.82□□□□□ -1.48
Scn1bP97952 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.82□□□□□ -1.48
Scn1bP97952 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC5.82□□□□□ -1.48
Scn1bP97952 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.82□□□□□ -1.48
Scn1bP97952 Gm25277-201ENSMUST00000157266 324 ntBASIC5.82□□□□□ -1.48
Scn1bP97952 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1bP97952 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Scn1bP97952 Gm23139-201ENSMUST00000179454 132 ntBASIC5.82□□□□□ -1.48
Scn1bP97952 Gm9274-201ENSMUST00000182505 984 ntBASIC5.82□□□□□ -1.48
Scn1bP97952 Mir8094-201ENSMUST00000183361 117 ntBASIC5.82□□□□□ -1.48
Scn1bP97952 Mir6374-201ENSMUST00000184003 107 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms