Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm24434-201ENSMUST00000104081 132 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm17366-201ENSMUST00000167629 187 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm28443-201ENSMUST00000189081 698 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm3544-201ENSMUST00000196129 305 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm43392-201ENSMUST00000196560 434 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm43929-201ENSMUST00000203025 409 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm38276-201ENSMUST00000192446 1343 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm22370-201ENSMUST00000102422 83 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm14513-201ENSMUST00000117403 123 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm11198-201ENSMUST00000119771 974 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm15781-201ENSMUST00000120216 323 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm12890-201ENSMUST00000120885 373 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm16557-201ENSMUST00000159182 191 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm23632-201ENSMUST00000175289 125 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Mir5110-201ENSMUST00000175537 87 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Mir5107-201ENSMUST00000175586 88 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm27853-201ENSMUST00000184176 250 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm37152-201ENSMUST00000193369 1175 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 BC049739-201ENSMUST00000202626 660 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm18467-201ENSMUST00000208805 434 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm8526-201ENSMUST00000079153 475 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm15732-201ENSMUST00000079794 480 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm10221-201ENSMUST00000088299 309 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms