Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm10688-201ENSMUST00000214985 520 ntBASIC6.9□□□□□ -1.3
NcanP55066 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.9□□□□□ -1.3
NcanP55066 Gm9321-201ENSMUST00000221179 778 ntBASIC6.9□□□□□ -1.3
NcanP55066 CT009754.4-201ENSMUST00000221430 565 ntBASIC6.9□□□□□ -1.3
NcanP55066 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.9□□□□□ -1.3
NcanP55066 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.9□□□□□ -1.3
NcanP55066 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.9□□□□□ -1.3
NcanP55066 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.9□□□□□ -1.3
NcanP55066 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.9□□□□□ -1.3
NcanP55066 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
NcanP55066 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NcanP55066 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NcanP55066 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NcanP55066 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NcanP55066 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NcanP55066 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NcanP55066 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NcanP55066 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.9□□□□□ -1.3
NcanP55066 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.9□□□□□ -1.3
NcanP55066 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.9□□□□□ -1.3
NcanP55066 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.9□□□□□ -1.31
NcanP55066 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
NcanP55066 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.9□□□□□ -1.31
NcanP55066 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.9□□□□□ -1.31
NcanP55066 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.9□□□□□ -1.31
NcanP55066 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
NcanP55066 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 AC164883.2-201ENSMUST00000227931 3815 ntBASIC6.9□□□□□ -1.31
NcanP55066 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NcanP55066 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
NcanP55066 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.89□□□□□ -1.31
NcanP55066 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Gm14870-201ENSMUST00000118414 156 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm15233-201ENSMUST00000118747 400 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm7670-201ENSMUST00000121272 641 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm12444-201ENSMUST00000121512 877 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm22106-201ENSMUST00000122544 127 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.89□□□□□ -1.31
NcanP55066 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Gm23050-201ENSMUST00000158775 165 ntBASIC6.89□□□□□ -1.31
NcanP55066 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NcanP55066 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Gm26057-201ENSMUST00000178099 165 ntBASIC6.89□□□□□ -1.31
NcanP55066 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Gm36935-201ENSMUST00000192526 292 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm9517-201ENSMUST00000195021 874 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm8869-201ENSMUST00000195222 947 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Gm42799-201ENSMUST00000201331 328 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm44705-201ENSMUST00000206719 339 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm17999-201ENSMUST00000211568 542 ntBASIC6.89□□□□□ -1.31
NcanP55066 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm5119-201ENSMUST00000215858 634 ntBASIC6.89□□□□□ -1.31
NcanP55066 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NcanP55066 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NcanP55066 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.89□□□□□ -1.31
NcanP55066 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.89□□□□□ -1.31
NcanP55066 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.89□□□□□ -1.31
NcanP55066 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.89□□□□□ -1.31
NcanP55066 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
NcanP55066 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.89□□□□□ -1.31
NcanP55066 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NcanP55066 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms