Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rfx1P48377 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rfx1P48377 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Rfx1P48377 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 AC169038.1-201ENSMUST00000227378 1352 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Gm12985-201ENSMUST00000118376 183 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Gm12638-201ENSMUST00000119531 298 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Gm12361-201ENSMUST00000119806 1044 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Gm25082-201ENSMUST00000177296 255 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Rfx1P48377 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Rfx1P48377 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Gm43345-201ENSMUST00000199484 269 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rfx1P48377 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC8.28□□□□□ -1.08
Rfx1P48377 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 AC173482.2-201ENSMUST00000224044 750 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rfx1P48377 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Rfx1P48377 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Rfx1P48377 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Rfx1P48377 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Rfx1P48377 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.28□□□□□ -1.08
Rfx1P48377 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.28□□□□□ -1.08
Rfx1P48377 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rfx1P48377 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Rfx1P48377 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.27□□□□□ -1.08
Rfx1P48377 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Rfx1P48377 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm44220-201ENSMUST00000203784 2487 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 CT009480.2-201ENSMUST00000225152 3369 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm42440-201ENSMUST00000197906 2284 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rfx1P48377 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rfx1P48377 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm14645-201ENSMUST00000118597 417 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm12889-201ENSMUST00000118684 241 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm14016-201ENSMUST00000119095 486 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm11198-201ENSMUST00000119771 974 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm7991-201ENSMUST00000168668 591 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm17973-201ENSMUST00000174509 520 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm38164-201ENSMUST00000192810 330 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm17967-201ENSMUST00000195319 647 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm42580-201ENSMUST00000197223 753 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms