Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm27158-201ENSMUST00000183813 238 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm37526-201ENSMUST00000194640 619 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm32158-201ENSMUST00000200135 404 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm3785-201ENSMUST00000221000 202 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm24411-201ENSMUST00000083428 131 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.02□□□□□ -1.45
Tnfsf4P43488 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.02□□□□□ -1.45
Tnfsf4P43488 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm15216-201ENSMUST00000118058 277 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm12535-201ENSMUST00000121025 484 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm25244-201ENSMUST00000178089 132 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm6489-201ENSMUST00000178167 696 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm25617-201ENSMUST00000179548 133 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm27186-201ENSMUST00000184223 307 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm25617-202ENSMUST00000198387 132 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm43561-201ENSMUST00000199866 448 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.01□□□□□ -1.45
Tnfsf4P43488 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Tnfsf4P43488 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Tnfsf4P43488 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Tnfsf4P43488 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Tnfsf4P43488 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Tnfsf4P43488 Gm4994-201ENSMUST00000118379 2187 ntBASIC6□□□□□ -1.45
Tnfsf4P43488 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Tnfsf4P43488 Gm10826-201ENSMUST00000215366 3304 ntBASIC6□□□□□ -1.45
Tnfsf4P43488 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Tnfsf4P43488 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6□□□□□ -1.45
Tnfsf4P43488 Gm24048-201ENSMUST00000102411 106 ntBASIC6□□□□□ -1.45
Tnfsf4P43488 Gm23527-201ENSMUST00000104570 130 ntBASIC6□□□□□ -1.45
Tnfsf4P43488 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6□□□□□ -1.45
Tnfsf4P43488 Gm15786-201ENSMUST00000121079 450 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms