Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC8.48□□□□□ -1.05
Col18a1P39061 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm43190-201ENSMUST00000187850 1779 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
Col18a1P39061 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm13416-201ENSMUST00000117264 1612 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm14833-201ENSMUST00000118345 1027 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm25489-201ENSMUST00000158727 141 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm6611-201ENSMUST00000163830 1272 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm27679-201ENSMUST00000184612 84 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm28648-201ENSMUST00000190092 343 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm20177-201ENSMUST00000203705 334 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm45596-201ENSMUST00000209279 434 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm4032-201ENSMUST00000210886 487 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 AC164315.1-201ENSMUST00000226452 708 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm43745-201ENSMUST00000198085 1883 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm44897-201ENSMUST00000206187 1341 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Col18a1P39061 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm14331-201ENSMUST00000120396 409 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm22588-201ENSMUST00000157510 140 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Gm23031-201ENSMUST00000157998 119 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Gm28917-201ENSMUST00000187294 237 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Gm23011-202ENSMUST00000197855 275 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC8.47□□□□□ -1.05
Col18a1P39061 AC126673.2-201ENSMUST00000221052 686 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 AC123665.6-201ENSMUST00000228568 538 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Col18a1P39061 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm24041-201ENSMUST00000083115 156 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Gm23502-201ENSMUST00000083902 145 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm43900-201ENSMUST00000204868 2669 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.47□□□□□ -1.05
Col18a1P39061 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col18a1P39061 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col18a1P39061 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC8.46□□□□□ -1.05
Col18a1P39061 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms