Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Usp4P35123 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp4P35123 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp4P35123 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp4P35123 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp4P35123 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Gm7821-201ENSMUST00000117111 788 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm13754-201ENSMUST00000120486 998 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm12804-201ENSMUST00000121030 999 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm15316-201ENSMUST00000121082 421 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Gm26321-201ENSMUST00000157740 242 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm26000-201ENSMUST00000157991 107 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC7.08□□□□□ -1.28
Usp4P35123 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Gm29492-201ENSMUST00000187124 457 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm38373-201ENSMUST00000192042 288 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Mir703-201ENSMUST00000197105 109 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm36448-201ENSMUST00000199916 438 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm43926-201ENSMUST00000203978 430 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm44111-201ENSMUST00000204649 399 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Gm45100-201ENSMUST00000209153 391 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm20946-201ENSMUST00000212367 461 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.08□□□□□ -1.28
Usp4P35123 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.08□□□□□ -1.28
Usp4P35123 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp4P35123 AC134864.1-201ENSMUST00000226326 511 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp4P35123 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp4P35123 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp4P35123 Gm23448-201ENSMUST00000083151 104 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Usp4P35123 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Usp4P35123 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.08□□□□□ -1.28
Usp4P35123 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp4P35123 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp4P35123 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Usp4P35123 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp4P35123 Gm25760-201ENSMUST00000103989 132 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp4P35123 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp4P35123 Gm12944-201ENSMUST00000119262 463 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm9208-201ENSMUST00000120468 948 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm12903-201ENSMUST00000121015 544 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm15057-201ENSMUST00000121516 534 ntBASIC7.07□□□□□ -1.28
Usp4P35123 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp4P35123 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Gm5268-201ENSMUST00000189212 940 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm37741-201ENSMUST00000191768 1256 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm8101-201ENSMUST00000192796 478 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp4P35123 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp4P35123 Gm3511-201ENSMUST00000199823 204 ntBASIC7.07□□□□□ -1.28
Usp4P35123 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms