Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm24989-201ENSMUST00000104461 88 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm12175-201ENSMUST00000122081 345 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.8□□□□□ -1.48
Hoxc5P32043 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
Hoxc5P32043 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm37439-201ENSMUST00000193150 856 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm45626-201ENSMUST00000210093 361 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 AC165349.1-201ENSMUST00000217896 424 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm24036-201ENSMUST00000082868 156 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.8□□□□□ -1.48
Hoxc5P32043 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc5P32043 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Hoxc5P32043 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxc5P32043 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm25344-201ENSMUST00000104503 132 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc5P32043 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm27853-201ENSMUST00000184176 250 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm29156-201ENSMUST00000187764 499 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm38291-201ENSMUST00000193671 259 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxc5P32043 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm5928-201ENSMUST00000221839 466 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm19340-201ENSMUST00000221995 345 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 AC154323.2-201ENSMUST00000226557 1151 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 AC131033.1-201ENSMUST00000228223 279 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxc5P32043 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxc5P32043 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.79□□□□□ -1.48
Hoxc5P32043 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
Hoxc5P32043 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.78□□□□□ -1.48
Hoxc5P32043 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc5P32043 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc5P32043 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc5P32043 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc5P32043 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc5P32043 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Hoxc5P32043 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc5P32043 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc5P32043 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.78□□□□□ -1.48
Hoxc5P32043 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.78□□□□□ -1.48
Hoxc5P32043 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC5.78□□□□□ -1.48
Hoxc5P32043 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Hoxc5P32043 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.78□□□□□ -1.48
Hoxc5P32043 Gm14098-201ENSMUST00000119295 623 ntBASIC5.78□□□□□ -1.48
Hoxc5P32043 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc5P32043 Gm12101-201ENSMUST00000121590 390 ntBASIC5.78□□□□□ -1.48
Hoxc5P32043 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
Hoxc5P32043 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.78□□□□□ -1.48
Hoxc5P32043 Gm6081-201ENSMUST00000134472 489 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms