Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Col2a1P28481 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Col2a1P28481 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col2a1P28481 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col2a1P28481 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col2a1P28481 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Col2a1P28481 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm9930-201ENSMUST00000066742 3151 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm20486-201ENSMUST00000101544 128 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm12077-201ENSMUST00000117049 364 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm13740-201ENSMUST00000120590 310 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm23553-201ENSMUST00000157817 295 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm24359-201ENSMUST00000158418 221 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm24741-201ENSMUST00000158857 106 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm37774-201ENSMUST00000194401 245 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.16□□□□□ -1.26
Col2a1P28481 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.16□□□□□ -1.26
Col2a1P28481 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 AC156037.1-201ENSMUST00000221133 127 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 AC125543.3-201ENSMUST00000221991 126 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm19195-201ENSMUST00000222018 511 ntBASIC7.16□□□□□ -1.26
Col2a1P28481 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
Col2a1P28481 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col2a1P28481 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col2a1P28481 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.15□□□□□ -1.26
Col2a1P28481 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col2a1P28481 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col2a1P28481 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col2a1P28481 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.15□□□□□ -1.26
Col2a1P28481 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col2a1P28481 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col2a1P28481 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Col2a1P28481 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col2a1P28481 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Col2a1P28481 Gm11852-201ENSMUST00000120806 222 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.15□□□□□ -1.27
Col2a1P28481 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.15□□□□□ -1.27
Col2a1P28481 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 Gm6472-201ENSMUST00000178147 651 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col2a1P28481 Gm27004-201ENSMUST00000183300 727 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.15□□□□□ -1.27
Col2a1P28481 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.15□□□□□ -1.27
Col2a1P28481 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7.15□□□□□ -1.27
Col2a1P28481 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.15□□□□□ -1.27
Col2a1P28481 Gm46223-201ENSMUST00000215196 675 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 Gm4510-201ENSMUST00000218265 427 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col2a1P28481 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col2a1P28481 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col2a1P28481 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.15□□□□□ -1.27
Col2a1P28481 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col2a1P28481 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Col2a1P28481 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col2a1P28481 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col2a1P28481 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Col2a1P28481 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.14□□□□□ -1.27
Col2a1P28481 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Col2a1P28481 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Col2a1P28481 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col2a1P28481 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms