Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Mir7b-201ENSMUST00000083557 111 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Cdx1P18111 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdx1P18111 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Cdx1P18111 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdx1P18111 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm26419-201ENSMUST00000104272 133 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm16138-201ENSMUST00000159341 821 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm3208-201ENSMUST00000168281 427 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm25025-201ENSMUST00000175018 111 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm27160-201ENSMUST00000184837 199 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm27178-201ENSMUST00000184962 340 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 AC151901.1-201ENSMUST00000218274 180 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 AC154515.3-201ENSMUST00000225081 1159 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 AV026068-229ENSMUST00000225516 595 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 CT025630.2-201ENSMUST00000228293 487 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdx1P18111 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdx1P18111 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cdx1P18111 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.26□□□□□ -1.57
Cdx1P18111 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 BC055308-201ENSMUST00000193380 2538 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdx1P18111 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdx1P18111 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.26□□□□□ -1.57
Cdx1P18111 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
Cdx1P18111 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.25□□□□□ -1.57
Cdx1P18111 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm22671-201ENSMUST00000104420 134 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cdx1P18111 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdx1P18111 Gm13545-201ENSMUST00000119044 482 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm12174-201ENSMUST00000119853 813 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm12879-201ENSMUST00000120003 1182 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm14876-201ENSMUST00000120795 327 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC5.25□□□□□ -1.57
Cdx1P18111 Gm12929-201ENSMUST00000122406 370 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms