Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Upk3aQ9JKX8 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm15765-201ENSMUST00000118407 910 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm12399-201ENSMUST00000121475 446 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Mir1960-201ENSMUST00000157488 78 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Upk3aQ9JKX8 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm24069-201ENSMUST00000104512 127 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm11271-201ENSMUST00000116054 440 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm12713-201ENSMUST00000118404 764 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm24155-201ENSMUST00000175259 110 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm27005-201ENSMUST00000182783 921 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm43772-201ENSMUST00000202052 379 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm45473-201ENSMUST00000211452 616 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm24032-201ENSMUST00000083932 159 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.09□□□□□ -1.43
Upk3aQ9JKX8 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Upk3aQ9JKX8 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Upk3aQ9JKX8 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.08□□□□□ -1.44
Upk3aQ9JKX8 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms