Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm14621-201ENSMUST00000117709 689 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm12889-201ENSMUST00000118684 241 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm15233-201ENSMUST00000118747 400 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 H3f3c-201ENSMUST00000119459 411 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm11896-201ENSMUST00000121105 820 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm14383-201ENSMUST00000121637 386 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm14747-201ENSMUST00000149888 984 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Mup-ps4-201ENSMUST00000151005 539 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm23903-201ENSMUST00000157566 131 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm6921-201ENSMUST00000161478 435 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm6245-201ENSMUST00000164699 768 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm26914-201ENSMUST00000182262 223 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm7634-201ENSMUST00000185778 553 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm6074-201ENSMUST00000193340 451 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm30517-201ENSMUST00000197350 772 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm44773-201ENSMUST00000207374 557 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm45626-201ENSMUST00000210093 361 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm35619-201ENSMUST00000222548 600 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm18026-201ENSMUST00000222789 727 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm36993-201ENSMUST00000192983 2980 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 AC159301.1-202ENSMUST00000225860 2133 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.82□□□□□ -1.32
Nkx6-1Q99MA9 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Gm37457-201ENSMUST00000193639 2433 ntBASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 AC061963.2-201ENSMUST00000213541 2739 ntBASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Cblb-205ENSMUST00000227756 3378 ntBASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nkx6-1Q99MA9 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms