Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm24695-201ENSMUST00000083877 83 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm29486-201ENSMUST00000088648 372 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm22267-201ENSMUST00000104008 131 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm15016-201ENSMUST00000117300 720 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm5392-201ENSMUST00000122189 789 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm25318-201ENSMUST00000122554 314 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm23674-201ENSMUST00000157473 131 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm18717-201ENSMUST00000192744 1241 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm43531-201ENSMUST00000200676 1114 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm29778-201ENSMUST00000201667 466 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 AC132104.1-201ENSMUST00000213615 260 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm9535-201ENSMUST00000218499 768 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 AC110816.1-201ENSMUST00000218559 980 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 AC124510.2-201ENSMUST00000221958 683 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm18618-201ENSMUST00000222211 473 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim9Q8C7M3 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim9Q8C7M3 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim9Q8C7M3 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim9Q8C7M3 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.04□□□□□ -1.28
Trim9Q8C7M3 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms