Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm22744-201ENSMUST00000083444 65 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gskip-201ENSMUST00000051934 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 5031434C07Rik-201ENSMUST00000053559 2894 ntTSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 6430550D23Rik-202ENSMUST00000109617 1872 ntAPPRIS P4 TSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm45149-201ENSMUST00000206459 2172 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Casp8-203ENSMUST00000190213 1628 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Cd300e-201ENSMUST00000062787 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm28447-202ENSMUST00000186677 2230 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 4933431E20Rik-210ENSMUST00000152663 2358 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm37967-201ENSMUST00000195634 2665 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm43281-201ENSMUST00000202522 2704 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Ldb2-201ENSMUST00000070748 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 AC170188.1-201ENSMUST00000223710 1963 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Klhl10-201ENSMUST00000001599 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Kif1b-202ENSMUST00000055647 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Rtkn2-204ENSMUST00000118160 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm14803-201ENSMUST00000117163 361 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Mif-ps3-201ENSMUST00000118636 345 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm12376-201ENSMUST00000120538 607 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm13495-201ENSMUST00000121156 537 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC9.26□□□□□ -0.93
Trim35Q8C006 1700031F10Rik-202ENSMUST00000156018 609 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm23779-201ENSMUST00000157938 64 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm17072-201ENSMUST00000166673 658 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm21370-201ENSMUST00000177659 573 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm21188-201ENSMUST00000178618 573 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm5960-201ENSMUST00000188483 406 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm43749-201ENSMUST00000199345 352 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 AC153798.1-201ENSMUST00000219942 244 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 4930404H11Rik-202ENSMUST00000222756 1271 ntTSL 5 BASIC9.26□□□□□ -0.93
Trim35Q8C006 AC122858.1-202ENSMUST00000228290 986 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm9999-201ENSMUST00000070660 486 ntAPPRIS P5 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm23405-201ENSMUST00000082542 160 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm25853-201ENSMUST00000082793 132 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Mir195a-201ENSMUST00000083477 94 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Nuf2-201ENSMUST00000028000 2068 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 C6-204ENSMUST00000162585 2876 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Mlst8-201ENSMUST00000070888 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Cdc7-202ENSMUST00000076467 2785 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm43196-201ENSMUST00000201762 2114 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Col15a1-204ENSMUST00000107731 3253 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm14504-201ENSMUST00000119391 1497 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm44280-201ENSMUST00000204498 3111 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Trim35Q8C006 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim35Q8C006 Gm14653-201ENSMUST00000122069 1533 ntBASIC9.26□□□□□ -0.93
Trim35Q8C006 March7-201ENSMUST00000067542 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Cops2-201ENSMUST00000028635 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Ces1e-201ENSMUST00000034173 2073 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm11516-201ENSMUST00000118450 1582 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Hnrnpc-205ENSMUST00000227242 2617 ntBASIC9.25□□□□□ -0.93
Trim35Q8C006 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Ap3m1-201ENSMUST00000022371 1770 ntTSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trim35Q8C006 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms