Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Gm2654-201ENSMUST00000221381 1592 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 Gm38315-201ENSMUST00000194286 2437 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 Gm12229-201ENSMUST00000120487 468 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Gm28061-201ENSMUST00000189085 807 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 Gm18430-201ENSMUST00000197534 682 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 Gm43905-201ENSMUST00000204516 204 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC5.54□□□□□ -1.52
Rif1Q6PR54 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.54□□□□□ -1.52
Rif1Q6PR54 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm15709-201ENSMUST00000118354 213 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm14038-201ENSMUST00000121500 807 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm13738-201ENSMUST00000122437 469 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm6931-201ENSMUST00000183103 371 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm22865-201ENSMUST00000083949 214 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm10555-201ENSMUST00000193178 1791 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm14035-201ENSMUST00000117596 1475 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm15331-201ENSMUST00000120225 385 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm26037-201ENSMUST00000158150 311 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.53□□□□□ -1.52
Rif1Q6PR54 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Rif1Q6PR54 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Gm38339-201ENSMUST00000195479 1829 ntBASIC5.52□□□□□ -1.53
Rif1Q6PR54 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC5.52□□□□□ -1.53
Rif1Q6PR54 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Gm17841-201ENSMUST00000210711 2425 ntBASIC5.52□□□□□ -1.53
Rif1Q6PR54 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rif1Q6PR54 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.52□□□□□ -1.53
Rif1Q6PR54 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rif1Q6PR54 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms