Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc85aQ5SP85 Malat1-201ENSMUST00000172812 6983 ntBASIC8.06□□□□□ -1.12
Ccdc85aQ5SP85 Gm12183-201ENSMUST00000120566 1848 ntBASIC8.06□□□□□ -1.12
Ccdc85aQ5SP85 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm22774-201ENSMUST00000102084 109 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm14932-201ENSMUST00000117112 453 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm13196-201ENSMUST00000118297 379 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm11445-201ENSMUST00000119101 532 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Mup-ps21-201ENSMUST00000119998 448 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm16373-201ENSMUST00000129517 303 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm16284-201ENSMUST00000140995 400 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Mir1953-201ENSMUST00000157866 89 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm24050-201ENSMUST00000158623 290 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm9167-201ENSMUST00000182469 962 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm5692-201ENSMUST00000187254 1057 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm18699-201ENSMUST00000190713 243 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm38279-201ENSMUST00000194067 1131 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm30517-201ENSMUST00000197350 772 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm43004-201ENSMUST00000201872 703 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm45405-201ENSMUST00000211544 609 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 AC079644.3-201ENSMUST00000222452 357 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 AC167013.4-201ENSMUST00000226712 317 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm7204-201ENSMUST00000062591 600 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm44416-201ENSMUST00000204055 2066 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Nedd4l-204ENSMUST00000224347 3150 ntBASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc85aQ5SP85 Gm8734-201ENSMUST00000211669 1312 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm42727-201ENSMUST00000202446 2823 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm25498-201ENSMUST00000104424 129 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm14116-201ENSMUST00000117733 805 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm14925-201ENSMUST00000120611 438 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm12748-201ENSMUST00000120763 504 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm24383-201ENSMUST00000122691 333 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm10913-201ENSMUST00000133732 463 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm14747-201ENSMUST00000149888 984 ntBASIC8.04□□□□□ -1.12
Ccdc85aQ5SP85 Gm23773-201ENSMUST00000158985 296 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms