Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm9286-201ENSMUST00000173586 508 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm5974-201ENSMUST00000181607 986 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm8609-201ENSMUST00000182967 998 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm43768-201ENSMUST00000198380 1258 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm43196-201ENSMUST00000201762 2114 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm44770-201ENSMUST00000205395 1264 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Mir16-2-201ENSMUST00000083672 95 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm37946-201ENSMUST00000192064 347 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Ighv1-41-201ENSMUST00000194414 329 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm43147-201ENSMUST00000196944 542 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm5034-201ENSMUST00000199115 634 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm44665-201ENSMUST00000205381 251 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm19936-201ENSMUST00000216414 838 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 AC144783.1-201ENSMUST00000219103 960 ntBASIC12.98□□□□□ -0.33
Trim41Q5NCC3 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim41Q5NCC3 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm19031-201ENSMUST00000176280 1365 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm11821-201ENSMUST00000117335 979 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm13771-201ENSMUST00000117988 238 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Trav8-2-201ENSMUST00000130122 337 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm3221-201ENSMUST00000164869 440 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm27218-201ENSMUST00000183745 392 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm27684-201ENSMUST00000183778 80 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm28803-201ENSMUST00000190385 764 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm29369-201ENSMUST00000190674 615 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm4525-201ENSMUST00000198831 254 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm44192-201ENSMUST00000204195 556 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm44989-201ENSMUST00000204749 217 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm17992-201ENSMUST00000207346 1072 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm8189-203ENSMUST00000211159 1225 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 AC127224.1-201ENSMUST00000218094 453 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm37382-201ENSMUST00000193032 1596 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms