Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Klf10-202ENSMUST00000226363 2917 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 CT030662.1-201ENSMUST00000227380 232 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm44104-201ENSMUST00000204736 3777 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm37706-201ENSMUST00000195379 2765 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm43430-201ENSMUST00000196513 3897 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm24709-201ENSMUST00000104123 132 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm25315-201ENSMUST00000116823 121 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm11462-201ENSMUST00000117749 562 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm16056-201ENSMUST00000119293 135 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm15081-201ENSMUST00000119794 844 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm15618-201ENSMUST00000121610 452 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm12819-201ENSMUST00000122223 629 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm23756-201ENSMUST00000157582 114 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm5261-201ENSMUST00000185860 713 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm8241-201ENSMUST00000189286 816 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm38231-201ENSMUST00000192030 347 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm44342-201ENSMUST00000196874 129 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm44383-201ENSMUST00000198940 129 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm44192-201ENSMUST00000204195 556 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm44561-201ENSMUST00000208869 264 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm36371-201ENSMUST00000209043 1103 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col8a1Q00780 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Gm7240-201ENSMUST00000220769 664 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.11□□□□□ -1.43
Col8a1Q00780 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 AL590614.1-201ENSMUST00000226037 268 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 AC107453.2-201ENSMUST00000227714 655 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.11□□□□□ -1.43
Col8a1Q00780 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Col8a1Q00780 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms