Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm37493-201ENSMUST00000193167 433 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm43116-201ENSMUST00000199789 195 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm18781-201ENSMUST00000211252 924 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm9535-201ENSMUST00000218499 768 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm26079-201ENSMUST00000104066 133 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm6382-201ENSMUST00000118873 942 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm23031-201ENSMUST00000157998 119 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm23894-201ENSMUST00000158107 313 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm26037-201ENSMUST00000158150 311 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm22548-201ENSMUST00000174899 78 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm22655-201ENSMUST00000174949 96 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm25246-201ENSMUST00000175476 69 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm6061-201ENSMUST00000175860 492 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm9274-201ENSMUST00000182505 984 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm29519-201ENSMUST00000186994 398 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm20926-201ENSMUST00000194457 696 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm9517-201ENSMUST00000195021 874 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.59□□□□□ -1.51
Nkx3-1P97436 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.59□□□□□ -1.51
Nkx3-1P97436 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Nkx3-1P97436 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Nkx3-1P97436 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Nkx3-1P97436 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Nkx3-1P97436 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.59□□□□□ -1.52
Nkx3-1P97436 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nkx3-1P97436 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nkx3-1P97436 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.58□□□□□ -1.52
Nkx3-1P97436 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms