Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.42□□□□□ -1.22
Sox1P53783 Gm23539-201ENSMUST00000157537 224 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sox1P53783 Mir3097-201ENSMUST00000175356 67 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm29299-201ENSMUST00000185609 923 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm29598-201ENSMUST00000188996 588 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm29573-201ENSMUST00000190291 919 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm7897-201ENSMUST00000193981 554 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Gm43198-201ENSMUST00000200927 326 ntBASIC7.42□□□□□ -1.22
Sox1P53783 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Gm43922-201ENSMUST00000205071 328 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 Gm9269-201ENSMUST00000221661 578 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 AC131068.1-201ENSMUST00000226891 482 ntBASIC7.42□□□□□ -1.22
Sox1P53783 AC129208.2-201ENSMUST00000228506 320 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sox1P53783 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Sox1P53783 Gm24150-201ENSMUST00000082759 104 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 AC122346.2-201ENSMUST00000224326 2931 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Sox1P53783 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sox1P53783 Gm45183-201ENSMUST00000207937 1497 ntBASIC7.42□□□□□ -1.22
Sox1P53783 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox1P53783 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox1P53783 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Sox1P53783 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Sox1P53783 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Sox1P53783 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Sox1P53783 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms