Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Retreg1-203ENSMUST00000226438 2783 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm16074-201ENSMUST00000119524 444 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm15331-201ENSMUST00000120225 385 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm26489-201ENSMUST00000157880 264 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Mir3095-201ENSMUST00000175552 87 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm37358-201ENSMUST00000195492 479 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm4032-201ENSMUST00000210886 487 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm3785-201ENSMUST00000221000 202 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm9202-201ENSMUST00000223036 437 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Mir375-201ENSMUST00000083682 64 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.62□□□□□ -1.35
Cxcl12P40224 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Cxcl12P40224 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.62□□□□□ -1.35
Cxcl12P40224 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm24789-201ENSMUST00000104282 131 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm15901-201ENSMUST00000117663 941 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm24216-201ENSMUST00000158259 117 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm23259-201ENSMUST00000158318 303 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Mir3062-201ENSMUST00000174986 105 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm27972-201ENSMUST00000184720 137 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm27970-201ENSMUST00000184854 407 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm37770-201ENSMUST00000192855 772 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Gm18996-201ENSMUST00000214851 755 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.61□□□□□ -1.35
Cxcl12P40224 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cxcl12P40224 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cxcl12P40224 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cxcl12P40224 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms