Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Gm24855-201ENSMUST00000104848 97 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Gm16089-201ENSMUST00000117679 336 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Gm22276-201ENSMUST00000122469 129 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm25826-201ENSMUST00000157090 137 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Gm9499-201ENSMUST00000180888 964 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Gm37103-201ENSMUST00000191830 115 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Gm36999-201ENSMUST00000192756 1046 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Gm20368-201ENSMUST00000220716 301 ntBASIC9.47□□□□□ -0.89
Chd1P40201 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chd1P40201 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chd1P40201 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd1P40201 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Chd1P40201 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC9.46□□□□□ -0.89
Chd1P40201 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 AC165080.3-201ENSMUST00000217162 3116 ntBASIC9.46□□□□□ -0.89
Chd1P40201 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
Chd1P40201 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 Gm14762-201ENSMUST00000105109 1771 ntBASIC9.46□□□□□ -0.89
Chd1P40201 Gm13818-201ENSMUST00000119441 511 ntBASIC9.46□□□□□ -0.89
Chd1P40201 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 Gm9710-201ENSMUST00000198053 499 ntBASIC9.46□□□□□ -0.89
Chd1P40201 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC9.46□□□□□ -0.89
Chd1P40201 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC9.46□□□□□ -0.89
Chd1P40201 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Chd1P40201 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd1P40201 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd1P40201 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd1P40201 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd1P40201 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC9.46□□□□□ -0.9
Chd1P40201 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Chd1P40201 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Chd1P40201 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC9.46□□□□□ -0.9
Chd1P40201 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.46□□□□□ -0.9
Chd1P40201 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd1P40201 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Chd1P40201 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd1P40201 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd1P40201 AL450321.1-201ENSMUST00000220600 3550 ntBASIC9.46□□□□□ -0.9
Chd1P40201 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd1P40201 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC9.45□□□□□ -0.9
Chd1P40201 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Nedd4l-204ENSMUST00000224347 3150 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Gm37717-201ENSMUST00000192647 3027 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd1P40201 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.45□□□□□ -0.9
Chd1P40201 Gm37959-201ENSMUST00000191700 2897 ntBASIC9.45□□□□□ -0.9
Chd1P40201 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Ear-ps2-201ENSMUST00000100689 466 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Gm25537-201ENSMUST00000103851 109 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms