Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
P20040 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
P20040 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
P20040 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
P20040 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
P20040 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.66□□□□□ -1.5
P20040 Gm12842-201ENSMUST00000117298 476 ntBASIC5.66□□□□□ -1.5
P20040 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.66□□□□□ -1.5
P20040 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.66□□□□□ -1.5
P20040 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm12504-202ENSMUST00000148026 306 ntBASIC5.66□□□□□ -1.5
P20040 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 Gm25025-201ENSMUST00000175018 111 ntBASIC5.66□□□□□ -1.5
P20040 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm27186-201ENSMUST00000184223 307 ntBASIC5.66□□□□□ -1.5
P20040 Gm8502-201ENSMUST00000185708 901 ntBASIC5.66□□□□□ -1.5
P20040 Gm21147-201ENSMUST00000186046 913 ntBASIC5.66□□□□□ -1.5
P20040 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.66□□□□□ -1.5
P20040 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.66□□□□□ -1.5
P20040 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.66□□□□□ -1.5
P20040 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.66□□□□□ -1.5
P20040 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.66□□□□□ -1.5
P20040 Gm45626-201ENSMUST00000210093 361 ntBASIC5.66□□□□□ -1.5
P20040 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Gm45733-201ENSMUST00000212988 437 ntBASIC5.66□□□□□ -1.5
P20040 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.66□□□□□ -1.5
P20040 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.66□□□□□ -1.5
P20040 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.66□□□□□ -1.5
P20040 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
P20040 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
P20040 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.66□□□□□ -1.5
P20040 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.66□□□□□ -1.5
P20040 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.66□□□□□ -1.5
P20040 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
P20040 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
P20040 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.65□□□□□ -1.5
P20040 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
P20040 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
P20040 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.65□□□□□ -1.5
P20040 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 Gm24888-201ENSMUST00000104387 130 ntBASIC5.65□□□□□ -1.5
P20040 Gm23768-201ENSMUST00000104440 131 ntBASIC5.65□□□□□ -1.5
P20040 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
P20040 Gm13338-201ENSMUST00000120235 361 ntBASIC5.65□□□□□ -1.5
P20040 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.65□□□□□ -1.5
P20040 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.65□□□□□ -1.5
P20040 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
P20040 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
P20040 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.65□□□□□ -1.5
P20040 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.65□□□□□ -1.5
P20040 Gm27295-201ENSMUST00000184264 153 ntBASIC5.65□□□□□ -1.5
P20040 Gm9127-201ENSMUST00000188041 985 ntBASIC5.65□□□□□ -1.5
P20040 Gm20128-201ENSMUST00000196189 417 ntBASIC5.65□□□□□ -1.5
P20040 Gm9504-201ENSMUST00000196322 468 ntBASIC5.65□□□□□ -1.5
P20040 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.65□□□□□ -1.5
P20040 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.65□□□□□ -1.5
P20040 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.65□□□□□ -1.5
P20040 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
P20040 AL929555.1-201ENSMUST00000215283 509 ntBASIC5.65□□□□□ -1.5
P20040 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
P20040 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.65□□□□□ -1.5
P20040 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.65□□□□□ -1.5
P20040 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.65□□□□□ -1.5
P20040 Gm8607-201ENSMUST00000221864 431 ntBASIC5.65□□□□□ -1.5
P20040 Gm35619-201ENSMUST00000222548 600 ntBASIC5.65□□□□□ -1.5
P20040 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.65□□□□□ -1.5
P20040 Gm6575-201ENSMUST00000222946 697 ntBASIC5.65□□□□□ -1.5
P20040 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.65□□□□□ -1.5
P20040 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.65□□□□□ -1.5
P20040 AC122533.1-201ENSMUST00000225177 767 ntBASIC5.65□□□□□ -1.5
P20040 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
P20040 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms