Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm5261-201ENSMUST00000185860 713 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm21728-201ENSMUST00000188442 695 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm21889-201ENSMUST00000188487 695 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20932-201ENSMUST00000189115 694 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm21920-201ENSMUST00000190042 695 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm8101-201ENSMUST00000192796 478 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm4525-201ENSMUST00000198831 254 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm42883-201ENSMUST00000202594 222 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm44279-201ENSMUST00000205154 472 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC5.28□□□□□ -1.56
Cdx1P18111 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC5.28□□□□□ -1.56
Cdx1P18111 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC5.28□□□□□ -1.56
Cdx1P18111 CT030166.4-201ENSMUST00000220640 404 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cdx1P18111 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdx1P18111 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Gm2108-201ENSMUST00000165058 2177 ntBASIC5.28□□□□□ -1.56
Cdx1P18111 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdx1P18111 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdx1P18111 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm25311-201ENSMUST00000104136 132 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdx1P18111 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm13156-201ENSMUST00000118348 321 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm14489-201ENSMUST00000120868 901 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm23888-201ENSMUST00000122690 253 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
Cdx1P18111 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm22795-201ENSMUST00000157233 118 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm26025-201ENSMUST00000158655 271 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm16113-201ENSMUST00000159629 372 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm3326-201ENSMUST00000164656 1043 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm24155-201ENSMUST00000175259 110 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm25640-201ENSMUST00000175378 125 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Mir7084-201ENSMUST00000183876 70 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Mir8105-201ENSMUST00000184718 89 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm28929-201ENSMUST00000185330 1193 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm9127-201ENSMUST00000188041 985 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm29650-201ENSMUST00000188485 742 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm28070-201ENSMUST00000191502 445 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm37355-201ENSMUST00000193345 606 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm17965-201ENSMUST00000193904 517 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdx1P18111 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Gm45196-201ENSMUST00000206751 825 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdx1P18111 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdx1P18111 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.27□□□□□ -1.57
Cdx1P18111 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms