Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm11498-201ENSMUST00000120660 949 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm23023-201ENSMUST00000158767 109 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm26362-201ENSMUST00000158865 315 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm22426-201ENSMUST00000103811 96 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm31211-201ENSMUST00000199170 253 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm7887-201ENSMUST00000056948 537 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm20302-201ENSMUST00000080671 275 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a3E9PWQ3 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm11488-201ENSMUST00000117277 863 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm23891-201ENSMUST00000158114 138 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm37841-201ENSMUST00000195367 376 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm14870-201ENSMUST00000118414 156 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm28390-201ENSMUST00000185212 700 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm42459-201ENSMUST00000199679 742 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 AC074315.1-201ENSMUST00000228801 214 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 AC154377.1-201ENSMUST00000226752 4979 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm44165-201ENSMUST00000203093 1469 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm14331-201ENSMUST00000120396 409 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm12466-201ENSMUST00000121199 620 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm26106-201ENSMUST00000157254 228 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm26034-201ENSMUST00000158154 116 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm8221-201ENSMUST00000178052 564 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Gm17984-201ENSMUST00000205286 859 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Mir449a-201ENSMUST00000083641 91 ntBASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a3E9PWQ3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms