Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm28637-201ENSMUST00000179424 345 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm18709-201ENSMUST00000180564 489 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm27401-201ENSMUST00000184052 173 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm29413-201ENSMUST00000186019 880 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm28597-201ENSMUST00000187664 666 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm29639-201ENSMUST00000188375 580 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm28337-201ENSMUST00000190425 666 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm43812-202ENSMUST00000202701 581 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm44971-201ENSMUST00000206192 337 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm45739-201ENSMUST00000213094 388 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 AL772265.1-201ENSMUST00000214379 305 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm19217-201ENSMUST00000218238 328 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm18960-201ENSMUST00000222962 713 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm17170-201ENSMUST00000112785 316 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm13414-201ENSMUST00000117516 727 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm15421-202ENSMUST00000118224 399 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm15778-201ENSMUST00000118469 608 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm12477-201ENSMUST00000121221 571 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm13459-201ENSMUST00000121558 646 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm7393-201ENSMUST00000172650 739 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Mir7669-201ENSMUST00000183442 58 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm18181-201ENSMUST00000190670 736 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm37710-201ENSMUST00000193501 1274 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm43926-201ENSMUST00000203978 430 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm45198-201ENSMUST00000206796 591 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 AC117797.2-201ENSMUST00000224419 531 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 CT572983.1-201ENSMUST00000226895 514 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 AC118250.1-201ENSMUST00000228569 875 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Fbxw23-202ENSMUST00000198480 1388 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm45262-201ENSMUST00000209917 1463 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.06□□□□□ -1.12
Trim11Q99PQ2 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm12740-201ENSMUST00000118794 308 ntBASIC8.05□□□□□ -1.12
Trim11Q99PQ2 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim11Q99PQ2 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms