Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm5334-201ENSMUST00000187472 720 ntBASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.22□□□□□ -1.41
Cdh23Q99PF4 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm12937-201ENSMUST00000118333 448 ntBASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm6620-201ENSMUST00000120113 715 ntBASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm6081-201ENSMUST00000134472 489 ntBASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm22867-201ENSMUST00000157499 109 ntBASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm24685-201ENSMUST00000157764 285 ntBASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 AC096628.1-201ENSMUST00000226060 641 ntBASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Cdh23Q99PF4 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm23224-201ENSMUST00000158122 271 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm18343-201ENSMUST00000172802 604 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm20545-201ENSMUST00000174739 210 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Mir133b-201ENSMUST00000083546 119 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Cdh23Q99PF4 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm26376-201ENSMUST00000104784 110 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm19206-201ENSMUST00000186401 827 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm43524-201ENSMUST00000197278 298 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms