Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm12242-201ENSMUST00000118824 738 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm14375-201ENSMUST00000119490 855 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm14925-201ENSMUST00000120611 438 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm14613-201ENSMUST00000122239 752 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm21392-201ENSMUST00000182950 972 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm29197-201ENSMUST00000185922 702 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm5260-201ENSMUST00000186157 949 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm5928-201ENSMUST00000221839 466 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Zmym2-202ENSMUST00000223669 1281 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm24032-201ENSMUST00000083932 159 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm12447-201ENSMUST00000119110 470 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm15311-201ENSMUST00000119682 282 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm15305-201ENSMUST00000120354 288 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm13462-201ENSMUST00000121472 961 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm14212-201ENSMUST00000122023 826 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm12833-201ENSMUST00000136112 477 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm24176-201ENSMUST00000158928 121 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Mir3473a-201ENSMUST00000175011 78 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm44582-201ENSMUST00000209125 445 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Mir3068-201ENSMUST00000083004 136 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms